Aspergillus niger: Introduction, Morphology, Pathogenicity, Lab Diagnosis, Treatment, Prevention, and Keynotes


Aspergillus niger is a filamentous fungus belonging to the genus Aspergillus. It is commonly found in the environment, especially in soil, decaying plant matter, and indoor environments such as homes and offices. It is known for its ability to produce a wide range of enzymes, organic acids, and secondary metabolites.

Morphologically, A. niger appears as a black or dark green mold with a velvety texture. It has a characteristic conidial head composed of chains of spores known as conidia. These conidia are responsible for the dispersal of the fungus in the environment.

A. niger is a versatile organism with a significant impact on various industries. It is widely used in biotechnology and industrial processes due to its ability to produce large quantities of enzymes. The fungus is particularly known for its production of the enzyme called glucoamylase, which is used in the food and beverage industry for starch hydrolysis. A. niger also produces other enzymes like amylases, proteases, and cellulases, which have applications in the production of biofuels, animal feed, and various other biotechnological processes.

Apart from its industrial uses, A. niger can also be a potential human pathogen. It can cause infections in individuals with weakened immune systems, particularly those with underlying lung diseases or immunodeficiencies. Pulmonary aspergillosis, an invasive lung infection, is the most common clinical manifestation associated with A. niger. Allergic reactions, such as allergic bronchopulmonary aspergillosis, can also occur in individuals with hypersensitivity to fungal antigens.


The morphology of Aspergillus niger is characteristic of the genus Aspergillus. Here are some key features of its morphology:

  • Hyphae: It has septate hyphae, which means that the hyphae are divided into distinct cells by crosswalls called septa. The hyphae are thin, branching filaments that form the main body of the fungus.
  • Conidiophores: Conidiophores are specialized hyphae that bear conidia (spores). In Aspergillus niger, the conidiophores are long, unbranched, and arise from the mycelium. They usually have a flask-shaped structure called a vesicle at the top, from which chains of conidia are produced.
  • Conidia: The conidia of Aspergillus niger are a distinguishing feature. They are typically globose or elliptical in shape and have a dark color, ranging from dark green to black. Conidia are formed in chains, known as conidial heads, that radiate from the vesicle of the conidiophore. These conidial heads give the fungus a characteristic appearance.
Aspergillus niger growth on SDA-conidia expressing  a distinguishing feature- typically globose or elliptical in shape and have a dark color, ranging from dark green to black
Fig. Aspergillus niger growth on SDA-conidia expressing a distinguishing feature- typically globose or elliptical in shape and have a dark color
  • Size: The size of Aspergillus niger can vary, but on average, the conidia are approximately 3-5 micrometers in diameter.
  • Pigmentation: It is known for its characteristic black or dark green color. This is primarily due to the production of dark pigments, such as melanin, by the fungus.


It is a species of filamentous fungus that is commonly found in the environment and can be associated with various types of infections. While it is generally considered to be of low pathogenicity, it can cause opportunistic infections, particularly in individuals with weakened immune systems or underlying health conditions.

In immunocompromised individuals, such as those with HIV/AIDS, organ transplant recipients, or individuals undergoing chemotherapy, Aspergillus niger can cause invasive aspergillosis. This is a serious condition characterized by the invasion of the fungus into various tissues, including the lungs, sinuses, and other organs. Invasive aspergillosis can be life-threatening and requires prompt medical intervention.

In addition to invasive aspergillosis, Aspergillus niger can also cause localized infections, such as otomycosis (ear infections) and onychomycosis (nail infections). These infections are usually confined to a specific area and may not pose a significant risk to overall health, but they can still cause discomfort and require treatment.

It’s important to note that most healthy individuals are able to resist infections caused by Aspergillus niger and other Aspergillus species due to their intact immune systems. However, individuals with compromised immunity or certain underlying health conditions are more susceptible to infections. If you suspect an Aspergillus niger infection or have concerns about your health, it is recommended to consult a healthcare professional for an accurate diagnosis and appropriate treatment.

Lab Diagnosis

The laboratory diagnosis of Aspergillus niger infections typically involves a combination of clinical evaluation, microscopy, and culture techniques. Here are some commonly used methods:

  1. Microscopy: Direct microscopic examination of clinical specimens, such as respiratory secretions, can be performed to identify Aspergillus species. A potassium hydroxide (KOH) preparation or Gram stain may be used to visualize fungal elements. Aspergillus species typically appear as septate hyphae with acute-angle branching and conidial heads.
  2. Culture: Culture is the gold standard for identifying and confirming the presence of Aspergillus niger. Clinical samples, such as sputum, bronchoalveolar lavage (BAL) fluid, or tissue biopsy, can be inoculated onto appropriate fungal culture media, such as Sabouraud dextrose agar or potato dextrose agar. Aspergillus colonies typically exhibit a characteristic appearance, with a velvety texture and a dark green to black color on the reverse side.
  3. Molecular techniques: Polymerase chain reaction (PCR) assays can be used to detect and identify Aspergillus niger DNA in clinical samples. PCR-based methods can provide rapid and specific identification of the fungus, even in cases where culture may be challenging or time-consuming.
  4. Serological tests: Serological tests, such as enzyme immunoassays (EIAs) or galactomannan antigen detection, are available for the diagnosis of invasive aspergillosis caused by various Aspergillus species. However, these tests may not specifically identify Aspergillus niger and are generally used to detect a range of Aspergillus infections.


The treatment of Aspergillus niger infections depends on the severity and location of the infection, as well as the overall health of the individual. In general, the treatment of Aspergillus niger infections may involve antifungal medications, surgical intervention, and management of underlying conditions. Here are some commonly used approaches:

  1. Antifungal Medications:
    • Azoles: Drugs such as voriconazole, itraconazole, and posaconazole are often considered the first-line treatment for Aspergillus infections, including those caused by Aspergillus niger. These medications inhibit the growth of the fungus by targeting its cell membrane.
    • Amphotericin B: In severe cases or when azoles are not effective, intravenous formulations of amphotericin B may be used. It is a broad-spectrum antifungal agent with activity against Aspergillus species.
    • Echinocandins: Medications like caspofungin, micafungin, or anidulafungin are alternative options for the treatment of invasive aspergillosis. They target the fungal cell wall.
  2. Surgical Intervention: In some cases, surgical intervention may be necessary, especially when the infection involves localized areas, such as sinuses or lungs. Surgery can help remove infected tissue, improve the effectiveness of antifungal therapy, and prevent further spread of the infection.
  3. Management of Underlying Conditions: Treating any underlying conditions that contribute to the susceptibility of Aspergillus infections is essential. This may involve optimizing the management of immunosuppression, controlling diabetes or other metabolic disorders, or addressing any other relevant health conditions.


Preventing Aspergillus niger infections involves taking measures to minimize exposure to the fungus, particularly for individuals who are at a higher risk of developing infections. Here are some general prevention strategies:

  1. Maintain good hygiene: Practicing good personal hygiene is crucial. Regularly wash your hands with soap and water, especially before handling food, after visiting healthcare facilities, and after coming into contact with soil or dusty environments.
  2. Avoid environments with high fungal spore concentrations: Aspergillus niger and other Aspergillus species are commonly found in the environment, particularly in soil, decaying vegetation, and indoor air. If you have a weakened immune system or respiratory conditions, try to minimize exposure to environments with high fungal spore concentrations, such as construction sites, dusty areas, or places with mold growth.
  3. Prevent and control moisture and mold: Aspergillus species thrive in damp environments. To prevent fungal growth, ensure good ventilation and control moisture in your living spaces. Repair any leaks in roofs, walls, or plumbing to minimize the risk of mold formation.
  4. Use appropriate respiratory protection: In situations where you may be exposed to high concentrations of fungal spores, such as during construction or cleaning activities, consider using a properly fitted N95 respirator mask. This can help filter out airborne particles, including fungal spores.
  5. Manage underlying health conditions: If you have underlying health conditions, such as HIV/AIDS, diabetes, or immunosuppression, work closely with your healthcare provider to manage these conditions effectively. Maintaining optimal health can help reduce the risk of fungal infections, including those caused by Aspergillus niger.
  6. Take precautions during hospital stays: Individuals who are hospitalized, particularly in high-risk areas like intensive care units or transplant wards, may be at an increased risk of Aspergillus infections. Hospitals should adhere to infection control practices, such as proper air filtration, cleaning protocols, and strict hand hygiene, to minimize the risk of fungal infections.


  • A. niger is a filamentous fungus commonly found in the environment, particularly in soil, decaying vegetation, and indoor air.
  • It is generally considered to be of low pathogenicity but can cause opportunistic infections, especially in individuals with weakened immune systems or underlying health conditions.
  • In immunocompromised individuals, A. niger can cause invasive aspergillosis, a serious condition that requires prompt medical intervention.
  • Laboratory diagnosis involves clinical evaluation, microscopy (KOH preparation or Gram stain), culture on appropriate fungal media, molecular techniques (PCR), and serological tests (for invasive aspergillosis).
  • Treatment of Aspergillus niger infections may involve antifungal medications such as azoles (e.g., voriconazole), amphotericin B, or echinocandins, surgical intervention in localized infections, and management of underlying conditions.
  • Prevention strategies include practicing good personal hygiene, avoiding high fungal spore environments, preventing and controlling moisture and mold, using respiratory protection when necessary, managing underlying health conditions, and adhering to infection control practices in healthcare settings.
  • Regular monitoring and follow-up are necessary during treatment, and decisions regarding therapy should be made in consultation with healthcare professionals experienced in managing fungal infections.

Further Readings

  1. Latgé, J. P. (1999). Aspergillus niger. Medical Mycology, 37(4), 219-222. doi: 10.1046/j.1365-280X.1999.00258.x
  2. Dagenais, T. R., & Keller, N. P. (2009). Pathogenesis of Aspergillus fumigatus in Invasive Aspergillosis. Clinical Microbiology Reviews, 22(3), 447-465. doi: 10.1128/CMR.00055-08
  3. Steinbach, W. J., & Perfect, J. R. (2003). Aspergillus: Molecular Biology and Genomics. Caister Academic Press.
  4. Patterson, T. F., Thompson, G. R., III, Denning, D. W., Fishman, J. A., Hadley, S., Herbrecht, R.,… Wingard, J. R. (2016). Practice Guidelines for the Diagnosis and Management of Aspergillosis: 2016 Update by the Infectious Diseases Society of America. Clinical Infectious Diseases, 63(4), e1-e60. doi: 10.1093/cid/ciw326
  5. Chamilos, G., Luna, M., Lewis, R. E., Bodey, G. P., Chemaly, R., Tarrand, J. J.,… Kontoyiannis, D. P. (2006). Invasive Fungal Infections in Patients with Hematologic Malignancies in a Tertiary Care Cancer Center: An autopsy Study over a 15-Year Period (1989-2003). Haematologica, 91(7), 986-989.

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