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Introduction Candida auris is an emerging multidrug-resistant yeast responsible for outbreaks of healthcare-associated infections worldwide. It is difficult to identify by conventional culture and biochemical methods, often misidentified as other Candida species (C. haemulonii, C. famata). Rapid and accurate detection is essential to initiate infection …
Introduction Respiratory tract infections are caused by a wide range of pathogens, including viruses, bacteria, and fungi. Conventional diagnostic methods such as culture, microscopy, and antigen detection are time-consuming and often lack sensitivity. Multiplex polymerase chain reaction (PCR) assays, applied directly to respiratory samples (sputum, …
Introduction Fungal identification by NGS (Next-Generation Sequencing) uses advanced DNA sequencing. Moreover, it rapidly detects diverse fungal species. It enhances diagnostic accuracy. Additionally, it supports personalized treatment decisions. Principle NGS sequences fungal DNA directly. Consequently, it generates millions of short DNA reads. Then, bioinformatics tools …
Introduction Fungal identification plays a vital role in diagnosing infections. Mycologists use various methods to identify fungal species. Firstly, conventional techniques rely on morphology and culture characteristics. Additionally, molecular assays enhance detection accuracy. Researchers now employ advanced tools to expedite fungal identification. Moreover, timely identification …
Introduction Pantoea agglomerans, a Gram-negative, facultative anaerobic bacterium, belongs to the Enterobacteriaceae family. Moreover, it is commonly found in soil, plants, and water. Interestingly, it plays a dual role as a plant symbiont and an opportunistic human pathogen. Additionally, P. agglomerans colonizes plant tissues and …
Introduction Next-generation sequencing (NGS) in Clinical Mycology is revolutionizing the diagnosis, typing, and antifungal resistance profiling of fungal pathogens. Application Here’s an overview of its applications: Candida spp.: Aspergillus spp.: CYP51A: Azole resistance due to mutations in ergosterol synthesis. Advantages of NGS in Clinical Mycology …
Introduction to Advanced Molecular Techniques in Clinical Mycology Clinical mycology laboratories play a crucial role in diagnosing and managing fungal infections. Traditional methods like culture and microscopy are often complemented by advanced molecular techniques to improve the accuracy and speed of fungal identification. Among these …
Introduction Aeromonas salmonicida is a notorious bacterium primarily targeting fish, causing the deadly disease known as furunculosis. Typically found in freshwater and marine environments, it poses a significant threat to aquaculture industries worldwide. This bacterium spreads quickly, particularly in crowded conditions like those found in …